Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKQARKRILIGGGSEQPMRKKMLFIP----FALLLSACSSVTQESDNTHLSSSISETVTSPEKSSTKTASTTEQTMATSNNEKKTALDQLKEQQPNVPMPLDVPVSSGYLNIAATHTKQ-GYSILYYRTDRPLGLNADELNQETPIATYLYQYGFASSQETIQVLQPFEIDTNGQQ-VDL---GSRITGYQQGAAGSSFLEW-QEGNWRIRIRGNNIEGQDPLLLAKEI--VAYLEENSLPAPEQFGKITVDMGDTTNRAVEVSWQEPKNAYTITHQD------PMSALKMAVSMKRL--------------------------------
4INO Chain:A ((34-335))--QEVKVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFHTWDRVVGISDYAFKSDIVKATLKDPERI----------KPMSSDHAAALNVELLKKLSP------DLVVTFVGNPKAVEHAKKFGISFLSFQ-EKTIAEVMEDIDTQAKALEVDASKKLAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQ--ALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWISPLSPEDVLN--------NPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEVEPFLWH


General information:
TITO was launched using:
RESULT:

Template: 4INO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1239 49031 39.57 194.57
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 39.57
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.113

(partial model without unconserved sides chains):
PDB file : Tito_4INO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4INO-query.scw
PDB file : Tito_Scwrl_4INO.pdb: