Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRMHLPTLLKNKEKSQRSRQMSSSKTIGIIGGGQLGQMMAISAIYMGHKVIALDPAADCPASRVAEIIVAPYNDVDALRQLADRCDVLTYEFENVDADGLDAVIK-DGQLPQGTDLLRISQNRIFEKDFLSNKSQVTVAPYKVVTSSLDLADI--DLSKNYVLKTATGGYDGHGQKVIRSEADLEAAYALADSADCVLEEFVNFDLEISVIVSGN-GKEVTFFPVQENIHRNNILSKTIVPAR-ISESLVDKAKAMAVRIAEQLNLSGTLCVEMFATDDDVIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGAPLPVIKLHAPAVMLNVLGQH-VEAAEQYVTENSSAHLHMYGKIEAKHNRKMGHVTLFSDVPDSVDELGEGIDF
3AW8 Chain:A ((1-357))-------------------------MIGILGGGQLGRMLALAGYPLGLSFRFLDPSPEACAGQVGELVVGEFLDEGALLRFAEGLALVTYEFENVPVEAARRLEGRLPL-YPPAKALEVAQDRLREKTFFQ-GLGVPTPPFHPVDGPEDLEEGLKRVGLPALLKTRR-G-----QALVRTEEEALEALKALGGRGLILEGFVPFDREVSLLAVRGRTGEVAFYPLVENRHWGGILRLSLAPAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVGEELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPLGSTAPRGQSAMVNLIGEKPPFA---EVLKVEGAHLHWYGK-AVRPGRKVGHITLRRDGLKALEEGLARLS-


General information:
TITO was launched using:
RESULT:

Template: 3AW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2017 -33252 -16.49 -96.38
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -16.49
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_3AW8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AW8-query.scw
PDB file : Tito_Scwrl_3AW8.pdb: