Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIRVIIAGFKGKMGQAACQMVLTDPDLDLVAVLDPFESESEWQGIPVFKDKADLAGFEADVWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAELKEFS-RAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIKTAELMAEVRESIQ--QGAADEEELIAGARGADFDGMRIHSVRLPGLVAHQEVIFGNQGEGLTLRHDSYDRISFMTGVNLGIKEVVKRHEL-VYGLEHLL
1C3V Chain:B ((1-242))--MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD------------PLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATST-SLPGARG-ADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAER-PGLTVGLEPLL


General information:
TITO was launched using:
RESULT:

Template: 1C3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1219 -101248 -83.06 -425.41
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -83.06
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_1C3V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1C3V-query.scw
PDB file : Tito_Scwrl_1C3V.pdb: