Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSWTFDNKKPIYLQIMEKIKLQIVSHTLEPNQQLPTVRELASEAGVNPNTIQRALSDLEREGFVYSKRTTGRFVTKDKELIAQSRKQLSEEELEHFVSSMTHFGYEKEELPGVVSDYIKGV
3NEU Chain:A ((5-123))-NPTFHADKPIYSQISDWMKKQMITGEWKGEDKLPSVREMGVKLAVNPNTVSRAYQELERAGYIYAKRGMGSFVTSDKALFDQLKKELADAITERFLEEAKSIGLDDQTAIELLIKRSRN-


General information:
TITO was launched using:
RESULT:

Template: 3NEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 330 -42514 -128.83 -357.26
target 2D structure prediction score : 0.83
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -128.83
2D Compatibility (Sec. Struct. Predict.) : 0.83
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.748

(partial model without unconserved sides chains):
PDB file : Tito_3NEU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NEU-query.scw
PDB file : Tito_Scwrl_3NEU.pdb: