Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAISTVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFGGHQGGFDNDSKFEDGQDDENNR
4QVD Chain:D ((6-65))-----SLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPS--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4QVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 221 -42402 -191.86 -706.70
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -191.86
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_4QVD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QVD-query.scw
PDB file : Tito_Scwrl_4QVD.pdb: