Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDKTARQKILDAAATLFYNDGITATGINTVTAKADVAKMSLYNNFSSKGELVDAYIAARHQEWLDLYQKRLEKTKTAKEAILAVFDAYQDHAEFAYEKGFRGCGLLNAAAEFPANSSGRNAVRQHKEQVEAIVAEHLNRL----LKDSQRVSYIASQLSFLLEGSMARAGLEGSSRQLQLARQMAEDILDRECQHD
3BQZ Chain:A ((2-186))----NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTQYY--YPL--QNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGL----


General information:
TITO was launched using:
RESULT:

Template: 3BQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 628 -45140 -71.88 -249.39
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -71.88
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.594

(partial model without unconserved sides chains):
PDB file : Tito_3BQZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BQZ-query.scw
PDB file : Tito_Scwrl_3BQZ.pdb: