Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKFNEIFLDLEQKILAKEYPPHSLLPSENQLIKIYGVSRETIRKALNLLTTEGYIQKKQGKGSIVLDRNRFDFPISGLTSYKELQETQRIPSETIIHTLEETEVTKALNEITGWEIGAPVWHLIRERKINGEVVILDTDYLLKEIVPILTPAQAQGSIYEYFENELSLTIAYAQKEITVEEVTEIMKTAMDLHDDTYA-VVVRSLVHLEDTRCFEYSESVHRLDKFRFVEFARRRKV
2OGG Chain:A ((9-152))--------------------------------------------------------------------------------------------TKTTVHKFGLEPPSELIQKQLRANLDDDIWEVIRSRKIDGEHVILDKDYFFRKHVPHLTKEICENSIYEYIEGELGLSISYAQKEIVAEPCTDEDRELLDLRGYD-HMVVVRNYVFLEDTSLFQYTESRHRLDKFRFVDFARRGK-


General information:
TITO was launched using:
RESULT:

Template: 2OGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 617 -50575 -81.97 -353.67
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -81.97
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.366

(partial model without unconserved sides chains):
PDB file : Tito_2OGG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OGG-query.scw
PDB file : Tito_Scwrl_2OGG.pdb: