Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAVAYQ--KAGPITLPEALVDIELDTPVAKGHDLLIRVQAVSVNPVDTKIRKNVSAE-----QSGWKVLGWDAVGTVEAIGDKVTQFKIGDVVWYAGAL-------------------------NRQGSNSELQLVDERIVGHKPKTLEATEAAALPLTAITAWEMLFDRL--QVPKTAPANTTILVIGGAGGVGSITIQLLKQLTNLTIIATASRPETKEWVEQLGADYVLDHRQS-----------------------LAAQIKLLG--LSAPLYVFSTTETDQHLSDIVELIAPQGHFGLIDDPDQLDI----KPFKSKSVSVHWEFMFTRSMFQTEDMEKQSALLNEVSKLVDEGKIKTTVTQVLSPINAENLTRVHEQIESGST-KGKIVLHGF
4GI2 Chain:A ((35-410))MYAWAIRRERHGPP--EQSHQLEVLPVWEIGDDEVLVYVMAAGVNYNGVWAGLGEPISPFDVHKGEYHIAGSDASGIVWKVGAKVKRWKVGDEVIVHCNQDDGDDEECNGGDPMFSPTQRIWGYETGDGSFAQFCRVQSRQLMARPKHLTWEEAACYTLTLATAYRMLFGHAPHTVR---P-GQNVLIWGASGGLGVFGVQLCAASG-ANAIAVISDESKRDYVMSLGAKGVINRKDFDCWGQLPTVNSPEYNTWLKEARKFGKAIWDITGKGNDVDIVFEHPGE-ATFPVSTLVAKRGGMIVFCAGTTGFNITFDARYVWMRQKRIQGS------------HFAHLKQASAANQFVMDRRVDPCMSEVF-PW--DKIPAAHTKMWKNQHPPGNMAVLV-


General information:
TITO was launched using:
RESULT:

Template: 4GI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1618 -7104 -4.39 -22.77
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -4.39
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_4GI2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GI2-query.scw
PDB file : Tito_Scwrl_4GI2.pdb: