Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKYQIKLSQLIKGCFIYAIANYALAQPIVVEGVVPNEASKQAILMKMQSVYGADQVVDKIQVRPVAAPNGWSDSVTRVITPDLKKVSQGKLSVNGTRFELTGKMLNPTEIQPTIQSFQSLVQPPYQLFSQLSVNQAEQKIIDDALKNRIIEFESGSAVLTEAGQKILDEMAVALNKVGGK-KVKIVGHTDSSGDATKNLKLSQDRALAVKNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKK---------NRRIEFTVL
4RHA Chain:A ((20-137))--------------------------------------------------------------------------------------------------------------------------------------------------LKSDVL-FNFNKSTLKPEGQQALDQLYSQLSNLDP-GSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEV-


General information:
TITO was launched using:
RESULT:

Template: 4RHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 355 -1581 -4.45 -14.92
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -4.45
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.635

(partial model without unconserved sides chains):
PDB file : Tito_4RHA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RHA-query.scw
PDB file : Tito_Scwrl_4RHA.pdb: