Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYTKNEEELQALGERLGHLLAKNDVLILTGELGAGKTTFTKGLAKGLQIS--QMIKSPTYTIVREYEGR-LPLYHLDVYRIEGDADSIDLDEFIFGGGVTVIEWGNLLGDALPDAYLELEILKEADGRRLNFQAKGL-RAEKLLEELQYGV-----------------------------------------------------------------------------------------------------------
4WIA Chain:A ((5-233))ELARIDLSRDDLDKRIGGGIPHGSLIIIEGEESTGKSVLCQRLAYGFLQNRYSVTYVSTQLTTLEFIKQMNSL-------------NYSINKKLLSGALLYIP---------------VYPLIADNKKKDGFLKK-VMETRAFYEKDVIIFDSISALIANDASEVNVDDLMAFFKRITALKKIIICTVNPKELPESVLTIIRTSATMLIRTELFTFGGDLKNLAKILKYNMAPGSYQKNIVFRVEPKIGIAVEIASVA


General information:
TITO was launched using:
RESULT:

Template: 4WIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 390 -4799 -12.30 -40.67
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -12.30
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.223

(partial model without unconserved sides chains):
PDB file : Tito_4WIA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WIA-query.scw
PDB file : Tito_Scwrl_4WIA.pdb: