Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLTLVRHGEAAPPVN---GNDIKRPLTARGHAQAEQTATFLKDIVKPNIFVVSPLLRAQETLAHIQTYFKDVPVLLCDKI----------------------------------KPDDDAKE-----AIEWLSQI------------PYESIVVVCHMNVVGHIAELLTHETF------NPFALAEARIYDQAVIAN-----GLSTQKNSFIPTI
4PZA Chain:B ((4-214))RRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQ-PLLIVSSDLRRAYDTAVKLGERTG-LVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNA---


General information:
TITO was launched using:
RESULT:

Template: 4PZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 544 8243 15.15 56.46
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : 15.15
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_4PZA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PZA-query.scw
PDB file : Tito_Scwrl_4PZA.pdb: