Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIGIPTETVVGENRVAATPETVKKLISAGHSVVIERGAGVKAAYIDSAYEQVGATITDDA-YTGSQIILKVRAPQGGEIQKLAANTTVVAMFDPYRN-TELDQFANQQVSAFALELLPRTLSRAQNMDVLSSQANLAGYKSVLLAAAEYQRMFPMLMTAAGTVKPARVVIMGVGVAGLQAVATAKRLGAIVEATDLRPTAKDQVESLGGKWLDVPMSEEEQQRAADAAKNGYGWMPGEQYIKDQAAIVDKAVSNADIVITTALLPGRDAPRLIKAETVAKMKPGSVILDMAVETGGNVEGSKVGETVVTENGVKILGIPNIPATVATEASALYARNVFNFVETLFDKEKNFA-INQEDEIQKAL-LVTHGGQVLLKRG
4DIO Chain:A ((32-399))EIVFIAKESDPNEGRVAGSVESVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKVRRPSAQEISGYRSGAVVIAIMDPYGNEEAISAMAGAGLTTFAMELMPR-ITRAQSMDVLSSQANLAGYQAVIDAAYEYDRALPMMMTAAGTVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVED---------------------GEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAG-KVTEVGGVRIVGHLNVAGRIAASASLLYAKNLVTFLETMV------ALALNMEDELVKATALTHGGAVV----


General information:
TITO was launched using:
RESULT:

Template: 4DIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2019 -69406 -34.38 -202.94
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -34.38
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_4DIO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DIO-query.scw
PDB file : Tito_Scwrl_4DIO.pdb: