Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAQAKKSVDIKNIRNFSIIAHIDHGKSTLADRFIQMCGGLQDRE--MQAQVLDSMELERERGITIKAASVTLYYTHPNGQEYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTAIEQGLEVLPILNKIDLPQAE----P-------ERVIHEIEEIIG---------IE--ATNAPTCSAKTGLG-------------------------------------------------------------------------------------------------------------VEGVLETLVDVIPAPTG---------------------------DREAPLQALIIDSWFDNY-LGVVSLVRIKDGRIRKGDKMLVKSTGQ---------THIVTSVGVFNP-KHTETGVLEAGEVGFVIAGIKDIFGAPVGDTITLSTT-PEVASLPGF-KKVKPQVYAGLFPIDASDFEPFREALQKLQINDSALFFEPESSDALGFGFRCGFLGMLHMEIVQERLEREYD-LDLISSAPTVVYEAVTKKGDT-----------I----YI--------------------------------------------------------------------------------------DSP-SKMPD--------------------G----------------SVVEDLREPIAECHILVPQEYLGNVMILCIERRGVQKDMKFLG--NQVSITFEIPMAEVVMDFFDKLKSCSRGFASLDYNFIRFESSSLVKVDVLINGEKVDALAMICHRNDARHRGIALVDKMKDLIPRQMFDVAIQAAIGAQIIARSTVKAMRKNVLAKCYGGDVSRKKKLLAKQKEGKKRMKQVGSVEIPQEAFLAVLKVER
3JB9 Chain:B ((136-923))-------TGTDDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKYRVSPELGNVCFASCDLGYCFTLSSFAKLYIDRHGGIDVDLFSKRLWGDIYFDSKTRKFAKQSLDGSGVRSFVHFILEPLYKLHTLTISDEAEKLKKHLSSFQIYLKPKDYLLDPKPLLQLICASFFGFPVGFVNAVTRHIPSPRENAARKASQSYIGPINSSIGKAILEMSREESAPLVMHVTKLYNTVDANNFYAFARVYSGQVKKGQKVKVLGENYSLEDEEDMVVAHIAEICVPCARYRLHVDGAVAGMLVLLG-GVDNS--ISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEES---GE-HTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDETIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDS-CGFETDLRVHTQGQAMCQMVFDHWQVVPG--------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3JB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2513 -8806 -3.50 -18.58
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -3.50
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_3JB9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JB9-query.scw
PDB file : Tito_Scwrl_3JB9.pdb: