Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGFEKRAQEKKKEILQAAFDLMNTDIGTAGVTMDKVAENAQVSKATIFKYFGSKEGLIYEVFFAFMNDLGQEAKALIAENLPFEETLIAMSENKIRY-LNRVNKQFYIDLMTYYTKK-EKKEFSDAMDAYTQESFSIMLDLFHRGRKEGKVDLKYSDEFLILYFQAMVEGISKPEI----YAKLLPYTAEWTEVLIKGIAPKKK
2GEN Chain:A ((6-193))----------RKDEILQAALACFSE-HGVDATTIEMIRDRSGASIGSLYHHFGNKERIHGELYLAGIGQYAALLEAGFARARSAEETVRLLVTSYIDWVVAN--PDWARFILHSRGRVEAGELGERL-RADNQAHFARIHAALAGYRAEGLFRE-MPDDCFASVVIGPAHDLARQWLAGRTRVALADCRELLAQVAWDSVRAA--


General information:
TITO was launched using:
RESULT:

Template: 2GEN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 659 -37344 -56.67 -205.18
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -56.67
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_2GEN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GEN-query.scw
PDB file : Tito_Scwrl_2GEN.pdb: