Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFQIQYKSSTRDGGNNVNGLFITIEGPDGAGKTSILNELYPLLKE---VAKTEIIQTREPGGIPIAEEIRAVILDPKNDRMDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLNEFATEGTTPDFTLYLDVDSDTGLRRIKKNRQNQIDRLDSEGLEFHQRVRHAYLKLAEENPERIHKVDA-------RKSFEEVLQTSYHTIIEQYPQFFEN
3V9P Chain:A ((23-224))-----------------ARGKFITFEGID---KTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILL---NQPMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLEALERWVQGGFQPDLTVLFDVPPQIASARRGAVRMP-----ESESDAFFARTRAEYLRRAQEAPHRFVIVDSSEPIAQIRKQLEGVL-----------------


General information:
TITO was launched using:
RESULT:

Template: 3V9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 767 8953 11.67 48.13
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 11.67
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_3V9P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V9P-query.scw
PDB file : Tito_Scwrl_3V9P.pdb: