Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRKPMIDSKAVVQAHNLFMTFKAENKKSADISAIVDLNMQIKKGELTALVGPDGAGKTTLLRLIAGLYKASSGSLHVLGLDIE-KHPQVVQDRISYMPQRFGLYEDLSVQENLNLYADLHGVPKNVRNQRFKRLLEITDLT-----------QFTQRLAGQLSGGMKQKLGLACTLVRSPELLLLDEPSVGVDPLSRRDLWIIIEQLVQEENLSVIISTAYMDEAEKCAYVYIMHEGKILRQGSPEQLKALVHEQTWQIKPSEQIKPRIVQAQLLGNSGEIIDAVPRGE-Q--VNF-I----SRQKE----------------------------L-STNI-L-----------------------P------------------------LGLVANR--R--PP-----------ELEDAFM---------------------------ML-----------LQQ--------------------------------------NQKQ-----------QI-----------------S-------------------------I---------------------------------SQQ----TFRSEQ------NNNSQSDQAVIVVKDLVRTFGD---FTAVANTSFTVQRGEIFGLLGPNGAGKTTTFRMLCGLLPASSGYLEVAGKNLRT-ARAEARAKVGYVSQKFALYSNLTVLENLKFFGGAYGLSGKKLDQQ-----IDKALQQYD--LKP-Q-IKSGDLPVGYKQRLSMAAALLHEPEILFLDEPTSGIDPLARHSFWYSIGKLANQGITIIITTHFMEEAEYCDRIAIQDAGKLLALGSPQQVRELASKDKHIVDMNEAFIAIVEQARALRHAG
5KO2 Chain:B ((385-1227))--------QGNLEFKNIHFSYPSR----KEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFAT-TIAENIRYGREDVT--M----DEIEKAVKEANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDQATSALDTESEAVVQAALDKAR--EGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHDELMREKGIY-FKLVMTQT-------------------DVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILF-DCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDQATSALDTESEKVVQEALDKAR-EGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKG--------------------------


General information:
TITO was launched using:
RESULT:

Template: 5KO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1995 8780 4.40 16.88
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 4.40
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_5KO2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5KO2-query.scw
PDB file : Tito_Scwrl_5KO2.pdb: