Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPWLYWTLKPKHRIWAEEWQKEYQAYLMDMETVEIGENCFISPLAHIFAEPGRKIKIGDNCFIAADCSLHGPLEIGNEVAINHHCILDGGRAGIKLHDQVRIAAYCHLYAFDHGMQ------LDRPLYQQPVRSQGIEIEKDVWLGAHVGIKDGIKIGKHAVVGMNSMVTKDVEPYHIVGGNPAKFIRLRE
3VBI Chain:A ((18-188))-----------------MNSFYSQEELKKIGFLSVGKNVLISKKASIYNP--GVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKESLDDWYIYVGVPVRKIKAR-


General information:
TITO was launched using:
RESULT:

Template: 3VBI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 910 -131524 -144.53 -797.11
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -144.53
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_3VBI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VBI-query.scw
PDB file : Tito_Scwrl_3VBI.pdb: