Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQALFGGGCFWCVEAVFLQIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHTIQTLKDD-DLDIVTELSPAPTFYPAEDYHQNYYEKNPSQGYCNFAIPPKLLKLYSKFQHLMKDQ
3BQE Chain:A ((203-353))-----LAGGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDPTSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAEEYHQDYLIKNPN-GYCHIDI------------------


General information:
TITO was launched using:
RESULT:

Template: 3BQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 724 -35952 -49.66 -239.68
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -49.66
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_3BQE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BQE-query.scw
PDB file : Tito_Scwrl_3BQE.pdb: