Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRLQQFYIFTEVAKRQSFSEVANQLDLPRSTVTSAIQQLETHYGVRLFHRTTRKVSLTQDGQRILPECQNLLFDYEQLEQLIQTQKQHYRGTLKISMPSRIVHQVIIPELPDFYHRYPDIHLQLNSSDDLTDLIEKGIDCVVRVGELDNSSLIARFIGHLVMVNCASTQYLQDYGIPEQLNDLEQHKLINYA--GAVGEKQGEFIYQGGTVMMDSALSVNNTEAYIAAACAGLGIIQLPYYDVQDKIEQGILVEVLSAYIA-PSLPLNILYPNRSYIPKRLEVFMNW-VGEVLNRKCIVIF
3HHF Chain:B ((6-208))------------------------------------------------------------------------------------------QGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAG--DDSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSL-NTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG--------


General information:
TITO was launched using:
RESULT:

Template: 3HHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 951 -93479 -98.30 -474.51
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -98.30
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.315

(partial model without unconserved sides chains):
PDB file : Tito_3HHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HHF-query.scw
PDB file : Tito_Scwrl_3HHF.pdb: