Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLSLKSLQCFVTLVKTKSFTRTAEELYLTQPTISKILQQLEEQLQVQLLVKPDHGRKRQIELTEIGERIYQHAGELLQAEQNIFLEIENYQQLKTGTLKLG-VPPLGSQLLTTALFDFHRQWPDIELAFMEVGSRGIEQALLNNELDVGVLLQPFDEQTFNSIELCNYPLMVLLRRDA--TWATRKKINLEELQHQSFLMFP----ENFSLNSIILDACKQHGFYPTIACRTSQWHLLADMVLQRMGIALLPQYYTDMLDPTLFAAVPLEKPNIQWHLVMAWKKNLPVSPAVQAWLSIVRQHF--QHIKP
2H98 Chain:A ((89-300))------------------------------------------------------------------------------------------SQ----TLRIGYVSSLLYGLLPEIIYLFRQQNPEIHIELIECGTKDQINALKQGKIDLGFGRLKITDPAIRRIMLHKEQLKLAIHKHHHLNQFAATGVHLSQIIDEPMLLYPVSQKPNFA--TFIQSLFTELGLVPSKLTEIREIQLALGLVAAGEGVCIVPASAMDIGVKNLL-YIPILDDDAYSPISLAV-RNMDHSNYIPKILACVQEVFATHHIRP


General information:
TITO was launched using:
RESULT:

Template: 2H98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1054 -34953 -33.16 -172.18
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -33.16
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_2H98.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H98-query.scw
PDB file : Tito_Scwrl_2H98.pdb: