Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNIYQFEAELLVGDIKQFADYKGKVLLIVNTASKCGFTP-QFAGLEKLYEKYKDLGLEVLGFPCNQFGGQDPGSNKEIGTFCQRNYGVKFPMFAKVDVKGPEAHVIFRYLTRE--AKGILGSSTIKWNFTKFLVGKDGSVLNRYAPTTKPEALEADIEKALAS
2GS3 Chain:A ((28-181))--SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNA-IKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL------


General information:
TITO was launched using:
RESULT:

Template: 2GS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 767 -17868 -23.30 -118.33
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -23.30
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_2GS3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GS3-query.scw
PDB file : Tito_Scwrl_2GS3.pdb: