Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEMEKKSTGISKWGLVALVVSSSIGSGVF---GITSDLASSAAPGPAILSWIIVGIGILALVLSLNHLGEKRPDLDGGIFGYAEASFGKLGGFISGWGYWLSAWLGNV-AFATMLMSAMGEFFPIFKGGQNVPSILFASIFIWGLTLLVNNGVEGASVINTIVTICKLVPLFLFLIFVFIAFKVNIFTADFWGNVSDNLVNGTGQQGTIWLQIKGCLMVMMWVFVGIEGASVLANRAKK----RSEAQQASIIGLLCLLFIYILASILPYGVLSQEELATISQPAMANILKGIVGNWGAALINIGLIISIIGSWLSWTMLPAETTMLMARDGLLP-----KGWGKTNKKNAPTYSLVVTAILTNLFLLTFLVTDYAYQFAYSLCTAAILICYLLVGIYQVQFSLKEGIKKQVVIGGIAVVFELMGIILAGFSYVLLCSIAYLPGFCFYWIACRETKHQITGKEKVMIGLICVAALLSIGLLAVGWIKI 3GIA Chain:A ((3-377)) ----LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILS----GIYALLVAYSYTKLGAKIVS-NAGPIAFIHKAIGD--NIITG-ALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALN--FFGSKAVGRAEFFIVLVKLLILGLFIFAGL-ITIHPSYVIPDLAPSAVSGMIFASAIF-------------FLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKS------TEGLYITSALGVLFALLFNMEGVA-----SITSAVFMVIYLFVILSHYILIDEVGGRKEIVI--------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 3GIA.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2036 -210145 -103.21 -580.51 target 2D structure prediction score : 0.69 Monomeric hydrophicity matching model chain A : 0.68 3D Compatibility (PKB) : -103.21 2D Compatibility (Sec. Struct. Predict.) : 0.69 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.363

(partial model without unconserved sides chains): PDB file : Tito_3GIA.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3GIA-query.scw PDB file : Tito_Scwrl_3GIA.pdb: