Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSYEVKSLNEECGIFGVWGHPDAASVAYFGLHSLQHRGQEGAGI-VSNDRGKLKGHRDLGLLSEVFKDQRKLQQLTGEAAIGHVRYATAGNGSVDNIQPFLFKFHDQSIGLAHNGNLINARSLRKELEENGAIFHSNSDTEILMHLIRR--SEETDFLNKLKSALNEVKGGFAYLLMTETAMIAALDPNGFRPLAIGQMKNGAYVIASETCALEVIGARFIRDVQPGEIVIINDEGIQIDCFTKDTQLSICSMEYIYFARPDSNIAGINVHTARKNMGRNLAKESPVKADMVVGVPNSSLSAASGYAEASGIPYEIGLVKNQYIARTFIQPTPELREQGVRMKLSAVRGVVEGKKVIMVDDSIVRGTTSRRIVHLLKEAGAKEVHVRIASPPLKYPCFYGIDIQTRKELIAANHTIDEIKECIGADSLGFLSEEGLIESIGLEKDAPYSGLCMAYFNGDYPTPLYDYEEKYQESLKEKVSFF
4AMV Chain:A ((2-222))-----------CGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKV-QMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHV----SEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIG-LGMGENFIASDQLALLPVTRRFIF-LEEGDIAEITRRSVNI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1385 -23787 -17.17 -109.11
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -17.17
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_4AMV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AMV-query.scw
PDB file : Tito_Scwrl_4AMV.pdb: