Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQESNTLIFDVPDAFQVESIIGQGAYGAVCKAVF--CDDQIAVKKIPHYSRSEDTARRVLREIEILQNLQFCEQVVGCRLFFRPKSEEK--DVYVAMDYIPADLSSVIKNGAITLDESVVRYITCQLLLALRALHRCKVLHRDVSTRNILIHYNSQVFLCDFGLSRFFDPDEQLSFGVVTQWYRAPEIILDAA-YSYASDVWSVGVILGELLLRRHLFPGKSNDSANQLQLIFHLVGTPSKDVFDADRSFGRASQNAKNYALAYIERRPCPSTLVNLLSTAPVLHHSAIAAVPPQAVQLAEQLLQFDPAKRPSADEALRHPWFDPCRAFIDEVVQHQDEEEIPVFTQTQNMNVEELVKRIEEVVPVFSEDLLVEDDGGGAAGSA
2F9G Chain:A ((5-309))------IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTLREIKILKHFKH-ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH--IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID----------TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR--DYRHQLLLIFGIIGTPHSD------NDLRCIESPR--AREYIKSLP-------MYPAAPL--EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2F9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1337 -50126 -37.49 -179.66
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -37.49
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_2F9G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F9G-query.scw
PDB file : Tito_Scwrl_2F9G.pdb: