Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSRYERQEKIGEGTYGVVYKARDTSTAATVALKRIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHRLTIVFEYLDLDLKKYLDRENGNLDAATVQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISREKELKLGDFGLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEMATGT-PLFAGKNDADQLMRIFRFLGTPNNRVWPSMNQYPNSNNMLSQPEFLQNFEPEWSNVLGSVPGYEKLGCAGVDLLEKLLRYEPSERITAADALNHPYFSLQF
1H4L Chain:A ((3-287))---KYEKLEKI----YGTVFKAKNRETHEIVALKRVRLD----GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK---PYPMY-----PATTSLVNVVP---KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS---


General information:
TITO was launched using:
RESULT:

Template: 1H4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1409 -125161 -88.83 -453.48
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -88.83
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_1H4L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1H4L-query.scw
PDB file : Tito_Scwrl_1H4L.pdb: