Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKSK
5KGF Chain:C ((10-122))---------KARARAKSRSSRAGLQFPVGRVHRLLRRGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE-------


General information:
TITO was launched using:
RESULT:

Template: 5KGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 263 -29757 -113.14 -263.33
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain C : 0.96

3D Compatibility (PKB) : -113.14
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_5KGF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5KGF-query.scw
PDB file : Tito_Scwrl_5KGF.pdb: