Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWYWGDISREEVNDKLRDMPDGTFLVRDASTKMQGDYTLTLRKGGNNKLIKTYHRDGKYGFSDPLTFNSVVELINHY
4WAF Chain:B ((39-120))WYWGDISREEVNEKLRDTADGTFLVRDAST----DYTLTLRKGGNNKLIKIF-------FSDPLTFSSVVELINHY


General information:
TITO was launched using:
RESULT:

Template: 4WAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 204 -29428 -144.25 -452.73
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.93

3D Compatibility (PKB) : -144.25
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.795

(partial model without unconserved sides chains):
PDB file : Tito_4WAF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WAF-query.scw
PDB file : Tito_Scwrl_4WAF.pdb: