Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIHFSINKNLFLQALNITKRAISSKNAIPILSTVKIDVTNEGVTLIGSNGQISIENFISQKNEDAGLLITSLGSILLEASFFINVVSSLPDVTLDFKEIEQNQIVLTSGKSEITLKGKDSEQYPRIQEISASTPLILETKLLKKIINETAFAASTQESRPILTGVHF-VLSQHKELKTVATDSHRLSQKKLTLEKNSDDFD--VVIPSRSLREFS--AVFTDDIE---TVEIFFANNQILFRSENISFYT-RLLEGNYPDTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVSAHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISFISAVRPFTLVPADTDE----DFMQLITPVRTN
3P16 Chain:A ((13-399))-LTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEVSAEAQVGAE-------IVSPGSVLVSGRLLSDITRALPNKPVDV-HVEGNRVALTCGNARFSLPTMPVEDYPTLPTLPEETGL-LPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVL--AATDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALV--ADRGAQVRMEFADGSVRLSAGADDVGRAEEDLVVDY-AGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPVSGD-AVSTDYVYLLMPVR--


General information:
TITO was launched using:
RESULT:

Template: 3P16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1901 -88854 -46.74 -246.82
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -46.74
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_3P16.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3P16-query.scw
PDB file : Tito_Scwrl_3P16.pdb: