Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVAGLTNGELIAPMTYEEMVTSDFFEAWFQKFLLPTLTTPSVIIMDNARFHRMGKLELLCEEFGHKLLPLPPYSPEYNP-IEKTWAYIKKNLKKVLPSCNTFYEALFSCSCFN
5T3A Chain:A ((24-123))--SGLIYAERVKGETGQEFRVQTM--KWYAMF------APKSLQSDNGPAFVAESTQLLMKYLGIEHTTGIPWNPQSQALVERTHQTLKNTLEKLIPMFNAFESAL-------


General information:
TITO was launched using:
RESULT:

Template: 5T3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 219 -15544 -70.98 -163.62
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -70.98
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.407

(partial model without unconserved sides chains):
PDB file : Tito_5T3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T3A-query.scw
PDB file : Tito_Scwrl_5T3A.pdb: