Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKFSMEKENRGKNMAIPKYQYIKDELKNKIISGQFSSGDKFYTEAELISMYDVSSITVVRALNDLAKDGYIVRQQGKGTFVSRARKHKLVEFSDIELFNAKDDKVTVLSIERGNKLVYLEKLGLRGDQFYYKIERIRESNGVVYIYHTSYIPEQYINANYPNLEYYSSIYNRFKLDYHIHMNDEHFEEINEIVFPTPEHAASVLGVDEQFPTVLQTKITKLESTGQVLEYSETYKRSDYYKIKFISCDRDH
4ZSK Chain:A ((29-161))-------------------------------------------------------------------------------------------QLLDIGYITADDRLAGLLDITAGGRVL--------------RIERLRMANGEPMAIETTHLSAKRFPALRRSLVKYTSLYTALAEVYDVHLAEA--EETIETSLATPREAG-LLGTDVGLPMLMLSRHSQ-DRTGQPVEWVRSVYRGDRYK----------


General information:
TITO was launched using:
RESULT:

Template: 4ZSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 598 -49919 -83.48 -375.33
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -83.48
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_4ZSK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZSK-query.scw
PDB file : Tito_Scwrl_4ZSK.pdb: