Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVLMTMFGLVMLPLLFACSNNQSAGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQIVGSDIELAKAIATELGVELELSPMSFDNVLASVQSGKADLAISGVSKTDERSKVFDFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLLQNSSLVSLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDSKELKEAVDKTIQKLKESGELDKLIEDAFKASIEK
4PSH Chain:A ((2-225))---------------------------IDEIKSRGYLLVGLSADFPPFEF---VDENGNIVGFDVDLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAFSDPYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSK-YDGIKVVRFDKFTDAFLELKRGRADAVVLDSATARAFVAKNPDLVISSGVLSSEQ---YGIAVRKEDTDLLEFINSVLRELKKS-PYDVLIEKWF------


General information:
TITO was launched using:
RESULT:

Template: 4PSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1153 -124780 -108.22 -557.05
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -108.22
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4PSH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PSH-query.scw
PDB file : Tito_Scwrl_4PSH.pdb: