Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------MIYKVFYQETKERSPRRETTRTLYLDIDASSELE-GRITARQLVEENRPEYNIEYIELLSDKLLDYEKETGAFEITEF----------------------------------------------------------------------------
5FQ3 Chain:A ((15-213))FVTLEREGDEKIVLEKGQPFVEPGYYAEMNGEDITESVQIKGSVDVNTPGIYNLVYAAYNEDGFAKTFTRTVYVADNTASPLKSGIYTVAEGSKRTAPSV----VAFSGYEIVIFQMEPGIFYISDFLGGWYDQRAGYGPDYAMVGKFELNDDNTITPLESYVAGWGDSMDQMTNTLLDPATGTLKWTVAYAGQLSFDIIVKQ


General information:
TITO was launched using:
RESULT:

Template: 5FQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 267 2587 9.69 35.43
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 9.69
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.175

(partial model without unconserved sides chains):
PDB file : Tito_5FQ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FQ3-query.scw
PDB file : Tito_Scwrl_5FQ3.pdb: