Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKKQNLTSFQELTTTELNQITGGGWWEELLHETILSKFKITKALELPIQL
4LVP Chain:A ((19-40))--YQMSLLSFTEKGPQELLQLL-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4LVP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 18 187 10.36 9.33
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : 10.36
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.852

(partial model without unconserved sides chains):
PDB file : Tito_4LVP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LVP-query.scw
PDB file : Tito_Scwrl_4LVP.pdb: