Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKRFLALVWLRCQIILSNKSILLQVLVPFAFTYFYKYLMETQGKVNDQQALVLLMMCLPFSLALAVGSPITIILSEEKEKYNLQTLLLSGVKGSEYILSTMFLPFLLTFVIMGTT----PLILGVTIV-HTFNYITIVLLTSLSIILFYLLIGLTAKSQVVAQVISLPAMILVAFLP-----MLSSLDKTVAKITD-YSFMGLFTKFFT-------KWEGFSWNETLIPNLTLLIWIVLLLTLITITIRKKKIS
5XJY Chain:A ((661-1117))------------------------------------------------------MPLFMTLAWI-YSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISS-LIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIFASLLSPVAFGFGCEYFALFEEQ----------GFNLTTSVSMMLFDTFLYGVMTWYIEA-


General information:
TITO was launched using:
RESULT:

Template: 5XJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 591 -98456 -166.59 -579.15
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -166.59
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.210

(partial model without unconserved sides chains):
PDB file : Tito_5XJY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5XJY-query.scw
PDB file : Tito_Scwrl_5XJY.pdb: