Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVGRKKVIQETPVKQAAKEAGLSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLD-SMDFAVNVHASLLPRHRGGAPIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLLDTLPAYIAGDIKPEPQDTSQVTFSPNIKSEEEKLNWNKTNRQLFNQIRGM-NPWPVAHTFLKGDRFKIYEA--LPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIASFLNGVGRTLTVGERFGD
5J63 Chain:A ((4-278))--KTVVFAYHDMGCLGIEALLAAG-YEISAIFTHTDNP-GEKAFYGS--VARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHP---KAQPGSVISVAP--LLIACGDGALEI--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5J63.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1365 -105010 -76.93 -391.83
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -76.93
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_5J63.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J63-query.scw
PDB file : Tito_Scwrl_5J63.pdb: