Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLSQIDEMLIGDLDLQFVMP--WEFEDLNPEAFREFNRELYAHRFDLDYESYSVDNDIDLHLSNYYSSCETNKLIPSNCFFKLVEYMLVVLESRSFTSLFSNCVEFYNTKYSNEYLTFFLNLFSTSKSEVARDNLRMYITEIFDDKRYWANNELFDDSLLFEENLQQLQIIRVM
4AKR Chain:C ((29-59))--------------DVRALLPSESLLNASAGSTFREYNTSQMVSV----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 18 2427 134.81 83.67
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain C : 0.50

3D Compatibility (PKB) : 134.81
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_4AKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AKR-query.scw
PDB file : Tito_Scwrl_4AKR.pdb: