Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHTAVANVKLNWTYFCLILASTFLQGSSFVATKILLSSMSPLWVATIRFFIAALSLLPLIIYRYFKNPISLFNIPWLKLFVIGLFQTAGVMAFLNIGLGYTSPSTAAILMASNPLLVVILAMLILGERISIRALVGLIVAFIGVVICIGLGNTN---SGGIGRGEVLVILASSCWAIATIINKKFNLHLDPWVITFWQMLLGSLVLFLVALFSQQPFTLPTTESMWLTFLWLAIPASTGAMGLWFAALKIGGAIHTSGFLFLCPLFSAIITYFVLGTVLTSQELIGGFLIGTGIYVLSRYR
5I20 Chain:D ((2-284))----------SRSSATLIGFTAILLWSTLALATS-STGAVPPFLLTALTFTIGGAVGIAAGLARGV-G----LRQPWP-VWVHGIGGLFGYHFFYFSALKLAPPAEAGLVAYLWPLLIVLFSAFLPGERLRPAHVAGALMGLAGTVVLLGA-AGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFAR-VPTEVVAGFCLATAALSALCHILFEP-S--VWPVGSEWLAVVALGIGPVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGALAIACALIVGGAAVATLL-


General information:
TITO was launched using:
RESULT:

Template: 5I20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1358 -245003 -180.41 -887.69
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -180.41
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.342

(partial model without unconserved sides chains):
PDB file : Tito_5I20.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I20-query.scw
PDB file : Tito_Scwrl_5I20.pdb: