Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAVPHSSLNPVLIQLEQVSVHRDQRDILKKVDFALHENEIVTLIGPNGAGKSTLIKVLLGILKPSSGRVISNKKLKMAYVPQKFNPSHSLPLRVQDLL---DLEKC-SPALRQEIIQDTGIAKLQQSKVQQLSGGERQRVLLARALLRKPDILVLDEPMQGLDIQSEAELYEYVRSLPERYGCAILIVSHDLQWVMQGTQRVVCLNKHICCSGLPESIQQHPEYQAIFGTHRVFYQHHHDHCAHGDAAHPCPHNNRPHIHPEPEA
3J15 Chain:B ((365-531))-----------------------------------IRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKV--EWDLTVAYKPQYIKAEYEGT--VYELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVF------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 725 -25205 -34.76 -154.63
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -34.76
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.653

(partial model without unconserved sides chains):
PDB file : Tito_3J15.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J15-query.scw
PDB file : Tito_Scwrl_3J15.pdb: