Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGNSIGQLFRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRKEPDQVEIISGVFEGKTTGTPIGLLIRNTDQKSKDYGNIAQTFRPGHADYTYTQKYGFRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGILIRGHVTQIGNEVA----EKLDWNEVPNNPFFCGDVDAVPRFEALVKSLREQGTSCGAKLEILAEKVPVGWGEPVFDRLDADIAHAMMSINAVKGVEIGDGFAVAGQFGHETRDELTSHGFLANHAGGILGGISSGQTIRVAIALKPTASITTPGKTINLNREDTDVLTKGRHDPCVGVRATPIAEAMLAIVLMDHFLRHRAQNADVVPPFVPIEP
1SQ1 Chain:A ((2-353))---NTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRKG------------DKAQVLSGVFEGYTTGHPIAIVVF----------------------------------------SARESVARVAGGAVAAMLLRE-FDICVQSGVFGVGTFVSNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGLGEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGILGGISNGENLILKTYFKPTP---------------------GRHDPCVGVRGSVVASAMVRLVLADCLLLNASANLN----------


General information:
TITO was launched using:
RESULT:

Template: 1SQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1577 -98144 -62.23 -355.59
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -62.23
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_1SQ1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SQ1-query.scw
PDB file : Tito_Scwrl_1SQ1.pdb: