Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITETTKIRELDDAQLDAIRAEVAKVPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPIKK
2YKR Chain:M ((1-114))-ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKP---


General information:
TITO was launched using:
RESULT:

Template: 2YKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 461 -37382 -81.09 -327.91
target 2D structure prediction score : 0.83
Monomeric hydrophicity matching model chain M : 0.93

3D Compatibility (PKB) : -81.09
2D Compatibility (Sec. Struct. Predict.) : 0.83
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_2YKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YKR-query.scw
PDB file : Tito_Scwrl_2YKR.pdb: