Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSQNSVVAPLNTFSPKDLTAKKAEVDKWFREYTNGVVTVDRLETICRSLPVLGSAFAIGDIIIDIISMINKGGLDKVEIFDWLNLGIDVIGLVPMGPVGPSVRSAARPALFYVKNESEKIIKAQAKKLGKKTLTSQEVKKALSTGFKDSASVFLTTIIAENVAGTLENFAKKGQSLLNQILKEVGNWIVLLTKTIDDGFKKLVSGSLNGLPNLKRAGQQSLGVIKGIFELDGTRIVNNAKYATENVAKTVGKGYVNLANLAVSDEARAKVLALGAKIRSIGQVAQAKVNGLSDPNTLWTIGWLFSIMGMVAAKHRQKRAQIKAKETTKANASHPSTATDKSNKQAHAENNANQCKNCMGGTGGSITFAMGTEFFTHVDVQLGGIIQDSISRTYVSNLYQMDDAIFGARWVTPFTTKISRKFKYTSKKKDHKDYLNGLEYIGLDGRAIDLPDLKKGQSIYDPIEQYTYTVLSDQLHLIAYGEDEKRYYEKYGEDYRLSYIERKNGFKVALRYDHVSIDNKTILSDILFKQDDNLLAHLALQLTPQGLVSDIWTIKNGQLDRVLASYDYDQQGDLVQATNEFAASYYYQYTHHLITRYTDLTHRGMNLKWDGILPTSKAIEEWADNASRASKLEWDKNIRKTTVLDVEGNSTEHYYDIDGYTYRIVYPDNFEEWFFRDDAKNITLHIAKDGSKTSYTYDERGNVLTTTQDDGATSYFEYDEKNQLTGIVDAEQGRWFKQYDGSGNLIKEIDPLKHETAYVYNAMGLVTSITDAKGGSKSLKYDDQGNLISYTDCSGKETKWQYDERGRVISIENALNQKVEYFYTELTLENREPI----IKGLPLNAFGQLEKIKHAD---GTEEHFIHDAEGRLLSHVD---------PKQNITRYEYDEAGLILSRTDALNH-----------KLKYKWDRLGRLTRLINENGASYQFFYDVASRLVKEIDFDGKETVYHYDEK--SGQLATSIEVASAYGQ--DLKDRAAPKDRIQQFIFDNMGRLEQRTAGYGHYGLELEEKQTEEFAYDYMGRIIQAKNA----QSNLQWFYDAAGNLVQEHQQDYKINKTAVWKHQYDEINDRIKTTRPDGQVIDWLTYGSGHVQSLIVNGQ------DLVSFERDDLHREIARHYANGVSQEQQYDLA-GRLKSQMMLSEHENGYQNQYKRHNNALEQTSQLVQRLYQYDKTGELTAIRDTRR-----------GNIAYKYDPIGRLLEASSKL-------------------------GKETFSFDPASNIIDSYHSHKAQ--SYS----------Q--------TTEEKDYGYNRLVNNVVKEYLDQQYQYDAYGQLVRQKT-------SQGDLNLEWDVYGRMVKP
4O9X Chain:A ((1460-2016))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADTHVYDPIGREIKVITAKGWFRRTLFTPWFTVNEDENDTAAEV--------------DPKLYQKTPTVSVYDNRGLIIRNIDFHRTTANGDPDTRITRHQYDIHGHLNQSIDPRLYEAKQTNNTIKPNFLWQYDLTGNPLCTESIDAGRTVTLNDIEGRPLLTVTATGVIQTRQYETSSLPGRLLSVAEQTPEEKTSRITERLIWAGNTEAEKDHNLAGQCVRHYDT---------AGVTRLESLSLTGTVLSQSSQLLIDTQEANWTGDNETVWQNMLAD-----DIYTTLSTFDATGALLTQTDAKGNIQRLAYDVAGQLNGSWLTLKGQTEQVIIKSLTYSAAGQKLREEHGNDVITEYSYEPETQRLIGIKTRRPSDT-----------K-----VLQDLRYEYDPVGNVISIRNDAEATRFWHNQKVMPENTYTYDSLYQLISATGREMANIGQQSHQFPSPALPSDNNTYTNYTRTYTYDRGGNLTKIQHSSPATQNNYTTNITVSNRSNRAVLSTLTEDPAQVDALFD-AGGHQNTLISGQNLNWNTRGELQQVTLVKRDKGANDDREWYRYSGDGRRML-


General information:
TITO was launched using:
RESULT:

Template: 4O9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1729 118298 68.42 270.09
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : 68.42
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.140

(partial model without unconserved sides chains):
PDB file : Tito_4O9X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O9X-query.scw
PDB file : Tito_Scwrl_4O9X.pdb: