Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAFRNNVPQASWRLAKIALGGIVLTGLAVGTYAYAQQKPLPTVDKVELDRYLGVWYEVARKPAFFQK-KCAYNVSATYTLNENGNIVVDNRCYDNQKQLQQSISEAFVVNPPYNTKLKVSFLPEAVRWIPIIRGDYWILKLD-EDYQTVLVGEPSRK-----YLWVLSRTPHPHKEVVDEYLNYAKTLGFDIRDIIHTEYKE
2HZR Chain:A ((12-161))----------------------------------------PVQENFDVNKYPGRWYEIEKIPT----GRC---IQANYSLME-GKIKVLNQELRADGTVNQIEGEATPVNLTEPAKLEVKF-----SWF-MPSAPYHILATDYENYALVYSCTSISQSFHVDFAWILARNVALPPETVDSLKNILTSNNIDVKKMTVTD---


General information:
TITO was launched using:
RESULT:

Template: 2HZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 592 7300 12.33 52.90
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 12.33
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_2HZR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HZR-query.scw
PDB file : Tito_Scwrl_2HZR.pdb: