Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALTEKKKAFALAKRNGKDNKEAAILAGCPEKTASAAGARLAKDPDVIAYLERLEEATPEQAVKHEVKPLTTFTSIQTANKLDDPLEFLKSVY----TDQVEDMALRVR--------AAQAALPYVHGKVAEKGKKETKEDAAKAATKTGKFGTLNNQLPS
5TD8 Chain:C ((4-62))-----------------------------------------------------------------------------KDNLLDNPVEFLKEVRESFDIQQDVDAMKRIRHDLDVIKEESEARISKEHSKVSESNKK-------------------------


General information:
TITO was launched using:
RESULT:

Template: 5TD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 15 950 63.30 20.20
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.64

3D Compatibility (PKB) : 63.30
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_5TD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TD8-query.scw
PDB file : Tito_Scwrl_5TD8.pdb: