Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLSQFVNKTLKVLALCTGLISTSHFAQANDFVTHPNYLNFKQKAMSTYGLSGEQVDAAMNGAKNLPNIINIM---TRPGESKPWYDYRSMFLVEGTIQRGVRFKNQYADALNRAEQQFGVSQAVILGILGVETGYGANKGSFITRDALATLAFGYPRRAEYFGDELAALIAWTYKEGYPTNSIVGSYAGAIGFPQFMPSNISKYGVDFDGNGHIDLRNSAEDAIGSIANYLAKQGWQCDQPIGFIARYTGSNPESIIAKDLTQPTPYGALKNQGISPLNPLVKIDDLDLVNVIQLQDYNGPIYYLTYPNFQVITTYNKSRMYATAVWLLGTEVASR
1D0M Chain:A ((14-317))-----------------------------DFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQ---GPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLWDPV-DAIGSVANYFKAHGWVKGDQVAVMA--NGQAPG--LPNGFKTKYSISQLAAAGLTPQQPL---GNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVA--


General information:
TITO was launched using:
RESULT:

Template: 1D0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1492 -52514 -35.20 -180.46
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -35.20
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.575

(partial model without unconserved sides chains):
PDB file : Tito_1D0M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D0M-query.scw
PDB file : Tito_Scwrl_1D0M.pdb: