Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPFFGFTPSEGLLNDIQTGIANKNSSEPLYPLRDKIALQLNEEIIENVLTQLVQHFPA-SEKRDTAEKLAGYVKSTVAVLLKQLLSKAPNDVVKQSVEFSEKSLFKDPQGQYKVGVALDAGLVTNLKHNFAELQAGNDINKAALAELYKQFGDAMVRHFMSDFNKTLDLGMIKRKAADIGAAAVTKAVHIAIDKLIPSLNRTELKAMAEYHDGLFFN
2GRR Chain:B ((431-517))------------PADVSTFLAF-PSPEKLLRLGPKSSVLIAQQTDTSDPEKVVSAFLKVSSVFKDEATVRMAVQDAVDALMQKAFNS-SSFNSNTFLTRLL--------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 318 -21363 -67.18 -248.40
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.56

3D Compatibility (PKB) : -67.18
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_2GRR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GRR-query.scw
PDB file : Tito_Scwrl_2GRR.pdb: