Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNKNKRKQKHMSLLKEGIKMKDTGSSKQITTMTFIGMTCALVASVRNIPDVAATSWTMIFYMLVAVLLYAFPISLISGEFAGMFPQKGGPELWVSNALGKKWGFVVSWLLWVQMFPG---MVMVASALAPLFGNIIDNVPLGLNSKFTLVVILVVYWIITFLNL-KFDMAKIGGKVGVWLGLYVPLTMMLLLGF---------AAWIKVGIVPTGTLGSFSWDKLIPDTTTASSFVYFAPIMFIFTGIEMSSVYITRLENPVKTY----IRGVF-AALIFIFFVN-----ILNALVVANVVPKG---QMELNNIAQSISIYCQILGLPHLIVNLFSLLVFIGVAVQLSAWASGPAKTVTESARKGAYPPKFNFWKTNQFDVSKSVILTQSVIISIFALFYLLIPGVNQAFLMLVNSTTVIYCIV-YVIMGIAVLRLRYTHAKLNRPFRIGKKEKKSNLGVWTVVIVLFAAIGFSVGLTMKAGTWINLIAVTAISVILFVVPLCIEKIKKPSWEQEVAMLLEKEKGELDGKTGNETDSN 5J4N Chain:A ((31-403)) -----------------------------------------------LPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKD-PLVLT-----ITCVVVLWIFVLLNIVGPKMITRVQAVATVLAL-IPIVGIAVFGWFWFRGETYMAAWNVSGL---GTFGA------IQSTLNVT--------LWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGC-------------LG---SLGGWTLLAGQTAKAAADDGLFPPIFA--RVNKAGTPVAGLIIVGILMTIFQLSS-ISPNATKEF-GLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVV--------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 5J4N.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1815 -205970 -113.48 -595.29 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain A : 0.64 3D Compatibility (PKB) : -113.48 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.230

(partial model without unconserved sides chains): PDB file : Tito_5J4N.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5J4N-query.scw PDB file : Tito_Scwrl_5J4N.pdb: