Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIAIAGAGAMGSRIGLMLHQSGNEVLLIDRWPAHIEAIRTNGLIADFNGKEVVAKLPIYSPEEIIESNEHVDLIVALTKANQLDDMFCSIQSIITDNTYVLCLLNGLGHEDVLEKYVPKKNILFGITMWTAGLAGPGKVTLLGDGEIELENLEPEGEAFTKKVVEVFQEANLNPIYSHNVRYSIWRKACVNGTLNGLCTILDCNIAELGAQKAAESMVRTIVSEFASIAAKEGIIL--DQEEVYQHIASTYDPDNIGLHYPSMYQDLIKNHRLTEIDYINGAIWRKGQKYDIATPYCAFLTQLVHAKEGILGAE
3HWR Chain:A ((21-309))-KVAIMGAGAVGCYYGGMLARAGHEVILIAR-PQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQG---ADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLEQEVAAAVVYVATE-MAGPGHVRHHGRGEL---VIEPTSHGANLAAIFAAAGVPVE--TSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVKLPDDVALAIRRIAETMPRQS-----SSTAQDLARGKR-SEIDHLNGLIVRRGDALGIPVPANRVLHALVR---------


General information:
TITO was launched using:
RESULT:

Template: 3HWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1589 -188784 -118.81 -657.78
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -118.81
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_3HWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HWR-query.scw
PDB file : Tito_Scwrl_3HWR.pdb: