Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVKRPKRRISMQFGRFRLGMRTIKSALAVFLCILFFHLTQRGIPMIAALSAVFSLRQDLTTTVSFGKSRIIGNTLGGTLAIIYFFVKSYFHNDFLVELILLPILVIIVIVVSDGINNNSGIISAIATLLLIALSIPQGESALYAIQRVLDTFIGTFIAIGINFFLRPPETEKKEELSEDLVELQKKERLLRTNLQEIEAKIQKQKKNSED
5J0I Chain:A ((12-41))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RALEELEKALQELREMLRKLKESLEELKKN---


General information:
TITO was launched using:
RESULT:

Template: 5J0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1 -218 -218.00 -7.27
target 2D structure prediction score : 0.97
Monomeric hydrophicity matching model chain A : 0.44

3D Compatibility (PKB) : -218.00
2D Compatibility (Sec. Struct. Predict.) : 0.97
1D Compatibility (Hydrophobicity) : 0.44
QMean score : 0.840

(partial model without unconserved sides chains):
PDB file : Tito_5J0I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J0I-query.scw
PDB file : Tito_Scwrl_5J0I.pdb: