Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKGKTILVTGGTGSIGSEIVRQLLKYEPKAIRIYSRGEEKQFYMQQELSNHTNLRFLIGDIRDSQRIDYACRDV--DIIFHAAAMKHVPASEYNPMEAVKTNVMGTQNVIDAAIKN-----NVKHFVGISTDKVVSPTNTMGATKLLSEKLIIAANQYKGKTETIFSCVRFGNVMGSSGSVIPLFSKQIKNNKDITLTDVDMTRFMMSIPDAARLVLSAAMNSKFGETYVLKMPAINILTLAQSLIKIYNDTHDEKYRGEIKVVGIRPGEKLYEELMTTDEIERSYENDKMYIIPPHYH---ATDELYKDYEKIKITAYSSDATELMSGQEFIRIAKENNVVTW
4TQG Chain:A ((6-300))----KTIMIFGGSGSLGNRLIETYIN--NNIIVNYSRDESKHWSMELKYKSDK-LKNIIGDIRDFEKVQQSIMRINPDIIIIAAALKHIDRCEYEINECLDTNIKGLQNVLKVTEINRSNLSNLKAVCFVSTDKACSPVNSYGMSKAICETLVVEKSKYIKDIK--YVCVRYGNVLN------------------FTLTHTSMTRFIMTLDDSVKLIEYAIINGNSGEIVIPKLNSMYI----KDMIELFAD----KY--PIVITGLRSGERMYESLINDTQSMKTVPKGDYYHILPTYDPTIVTEEFYE-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4TQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1376 -47831 -34.76 -181.87
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -34.76
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_4TQG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TQG-query.scw
PDB file : Tito_Scwrl_4TQG.pdb: