Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIKSYTSIWAVEKVIYAINDFQLPFPVTFNQMAWFVLSLLFVIVFAHVPPLSMIEEVFLKYLGIPVAVTW-FMSQKTFDGKKPLGFLRSFISYHLRFKVTFAGKKVKEQKKRWDEPSTLVRSVNYVSD
3ZDQ Chain:A ((156-217))---------------------------------MMFFVSPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAF-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ZDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 25 -6621 -264.82 -108.53
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -264.82
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.62
QMean score : -0.125

(partial model without unconserved sides chains):
PDB file : Tito_3ZDQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZDQ-query.scw
PDB file : Tito_Scwrl_3ZDQ.pdb: